biopython >= 1.85
matplotlib >= 3.9.0
numpy >= 2.2.3
pandas >= 2.2.3
pomegranate >=1.0.0
pyparsing >= 3.1.2, < 3.3.0
pyfaidx >= 0.8.1.3
pysam >= 0.23.0
reportlab >= 4.3.1
scikit-learn >= 1.5.0
scipy >= 1.14.1
